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Variant Explorer
Extract variants
(either from a genomic region, either from a protein)
from :
SPAIN_2021_2023
Reference genome used to detect variants :
Zymoseptoria tritici IPO323
Select samples :
(max 20 samples)
21_CasTuj_L4,3
21_ConRic_L3,1
21_EciAmi_L1,3
21_EciCon_L4,3
21_EciRic_L4,1
21_EciTej_L1,1
21_EscAmi_L1,1
21_EscRic_L1,2
21_JerAmi_L1,3
21_JerRic_L4,4
21_ManTuj_L3,1
22_Conil3758_L1
22_Conil3806_L1
22_Conil3911_L1
22_ConilAmi_L1
22_ConilCris_L1
22_ConilFel_L1
22_Conil_Fer_L1
22_ConilMax_L1
22_ConilOrt_L1
22_ConilScul_L1
22_ConilVit_L1
22_Cor3806_L1
22_Cor3911_L1
22_Cor3927_L1
22_CorAmi_L1
22_CorAth_L1
22_CorCale_L1
22_CorCar_L1
22_CorCris_L1
22_CorFel_L1
22_CorFer_L1
22_CorIca200_L1
22_CorKiko_L1
22_CorMax_L1
22_CorOrt_L1
22_CorRic_L1
22_CorScul_L1
22_CorSim_L1
22_CorVal_L1
22_EcijaRegAmi_L1
22_EcijaRegBon_L1
22_EcijaRegKiko_L1
22_EcijaRegRum_L1
22_EcijaRegTej_L1
22_EcijaSec3758_L1
22_EcijaSec3806_L1
22_EcijaSec3911_L1
22_EcijaSec3927_L1
22_EcijaSec83Ica_L2
22_EcijaSecAmi_L1
22_EcijaSecAth_L2
22_EcijaSecBon_L1
22_EcijaSecCris_L1
22_EcijaSecEuro_L1
22_EcijaSecFel_L1
22_EcijaSecFer_L1
22_EcijaSecJos_L1
22_EcijaSecMax_L1
22_EcijaSecNor_L2
22_EcijaSecOrt_L1
22_EcijaSecRic_L1
22_EcijaSecRum_L1
22_EcijaSecSeb_L1
22_EcijaSecSha_L1
22_EcijaSecSim_L1
22_EcijaSecTej_L1
22_EcijaSecVal_L1
22_EcijaSecVit_L2
22_Esc3911_L2
22_Esc3992_L1
22_EscCale_L1
22_EscCar_L1
22_EscCris_L1
22_EscEuro_L1
22_EscFer_L1
22_EscIca_L1
22_EscJos_L1
22_EscMax_L1
22_EscOrt_L1
22_EscRic_L1,1
22_EscSim_L1
22_EscVal_L1
22_EscVit_L2
22_Jerez3911_L1
22_Jerez3927_L1
22_JerezEuro_L1
22_JerezFel_L1
22_JerezFer_L1
22_JerezFue_L1
22_JerezJos_L1
22_JerezMax_L1
22_JerezNor_L1
22_JerezRic_L1
22_JerezRum_L1
22_JerezSim_L1
22_JerezVal_L1
22_MontanaRic_L1
22_MonteraRic_L1
22_ViveroRic_L1
23_Cor3911_L1
23_Cor3922_L1
23_Cor4025_L1
23_Cor4061_L1
23_Cor4073_L1
23_Cor4125_L1
23_CorAmi_L1
23_CorAth_L1
23_CorCale_L1
23_CorCris_L1
23_CorEuro_L1
23_CorJos_L1
23_CorJul_L1
23_CorMax_L1
23_CorNor_L1
23_CorRic_L1
23_CorSeb_L1
23_CorVal_L1
23_CorVit_L1
Extract from a genomic region :
Reference sequence:
gnl|Mygr_323|chr_1
gnl|Mygr_323|chr_2
gnl|Mygr_323|chr_3
gnl|Mygr_323|chr_4
gnl|Mygr_323|chr_5
gnl|Mygr_323|chr_6
gnl|Mygr_323|chr_7
gnl|Mygr_323|chr_8
gnl|Mygr_323|chr_9
gnl|Mygr_323|chr_10
gnl|Mygr_323|chr_11
gnl|Mygr_323|chr_12
gnl|Mygr_323|chr_13
gnl|Mygr_323|chr_14
gnl|Mygr_323|chr_15
gnl|Mygr_323|chr_16
gnl|Mygr_323|chr_17
gnl|Mygr_323|chr_18
gnl|Mygr_323|chr_19
gnl|Mygr_323|chr_20
gnl|Mygr_323|chr_21
gnl|Mygr_323|chr_mito
start:
end:
Method:
assembly
polymorphism
Extract from a protein :
Reference protein :