Strain Previous_code Remarks Organism Collection_date Geo_localisation Geo_country Geo_continent Host Cultivar Center_Name Principal_investigator Sequencing_company Sequencing_project Assay_Type Sequencing_instrument Library_type Reads Seq_depth Consent IPO-091012.MS1 G01_myco Remove missing data Zymoseptoria tritici 2009 France: Plélo, Côtes-d'Armor, Bretagne France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 32 105 602 80,90 private IPO-09111.MS1 G02_myco Zymoseptoria tritici 2009 France: Catenoy, Oise, Picardie France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 13 506 730 34,03 private IPO-09115.MS1 G03_myco Zymoseptoria tritici 2009 France: Catenoy, Oise, Picardie France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 11 565 214 29,14 private IPO-09119.MS1 G04_myco Zymoseptoria tritici 2009 France: Catenoy, Oise, Picardie France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 15 219 594 38,35 private IPO-09127.MS1 G05_myco Zymoseptoria tritici 2009 France: Catenoy, Oise, Picardie France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 16 610 712 41,86 private IPO-09139.MS1 G06_myco Zymoseptoria tritici 2009 France: Catenoy, Oise, Picardie France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 13 804 036 34,78 private IPO-09145.MS1 G07_myco Zymoseptoria tritici 2009 France: Vraignes, Somme, Picardie France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 16 137 102 40,66 private IPO-09161.MS1 G08_myco Zymoseptoria tritici 2009 France: Vraignes, Somme, Picardie France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 7 068 144 17,81 private IPO-09176.MS1 G09_myco Zymoseptoria tritici 2009 France: Vraignes, Somme, Picardie [SL] France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 11 032 606 27,80 private IPO-09177.MS1 G10_myco Remove clone =G09 (not in analyzed population) Zymoseptoria tritici 2009 France: Vraignes, Somme, Picardie [SL] France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 14 789 924 37,27 private IPO-09202.MS1 G11_myco Zymoseptoria tritici 2009 France: Vraignes, Somme, Picardie France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 12 289 766 30,97 private IPO-09220.MS1 G12_myco Zymoseptoria tritici 2009 France: Vraignes, Somme, Picardie France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 14 263 290 35,94 private IPO-09232.MS1 G13_myco Zymoseptoria tritici 2009 France: Vraignes, Somme, Picardie France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 16 280 332 41,02 private IPO-09260.MS1 G14_myco Zymoseptoria tritici 2009 France: Vraignes, Somme, Picardie France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 13 898 512 35,02 private IPO-09274.MS1 G15_myco Zymoseptoria tritici 2009 France: Guyancourt, La Minière, Yvelines, Île-de-France France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 6 236 732 15,72 private IPO-09290.MS1 G16_myco Zymoseptoria tritici 2009 France: Guyancourt, La Minière, Yvelines, Île-de-France France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 15 353 782 38,69 private IPO-09306.MS1 G17_myco Zymoseptoria tritici 2009 France: Guyancourt, La Minière, Yvelines, Île-de-France France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 14 392 820 36,27 private IPO-09351.MS1 G18_myco Zymoseptoria tritici 2009 France: Guyancourt, La Minière, Yvelines, Île-de-France [SL] France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 15 128 036 38,12 private IPO-09352.MS1 G19_myco Remove clone =G18 (not in analyzed population) Zymoseptoria tritici 2009 France: Guyancourt, La Minière, Yvelines, Île-de-France [SL] France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 14 599 810 36,79 private IPO-09359.MS1 G20_myco Zymoseptoria tritici 2009 France: Guyancourt, La Minière, Yvelines, Île-de-France France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 13 766 898 34,69 private IPO-09373.MS1 G21_myco Zymoseptoria tritici 2009 France: Guyancourt, La Minière, Yvelines, Île-de-France France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 9 113 048 22,96 private IPO-09386.MS1 G22_myco Zymoseptoria tritici 2009 France: Guyancourt, La Minière, Yvelines, Île-de-France France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 13 117 016 33,05 private IPO-09399.MS1 G23_myco Zymoseptoria tritici 2009 France: Guyancourt, La Minière, Yvelines, Île-de-France France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 61 157 548 154,10 private IPO-09415.MS1 G24_myco Zymoseptoria tritici 2009 France: Etampes, Essonne, Île-de-France France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 12 656 642 31,89 private IPO-09427.MS1 G25_myco Zymoseptoria tritici 2009 France: Etampes, Essonne, Île-de-France France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 15 430 992 38,88 private IPO-09437.MS1 G26_myco Zymoseptoria tritici 2009 France: Etampes, Essonne, Île-de-France France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 10 014 128 25,23 private IPO-09446.MS1 G27_myco Zymoseptoria tritici 2009 France: Etampes, Essonne, Île-de-France France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 10 672 842 26,89 private IPO-09455.MS1 G28_myco Zymoseptoria tritici 2009 France: Etampes, Essonne, Île-de-France France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 14 992 888 37,78 private IPO-09465.MS1 G29_myco Zymoseptoria tritici 2009 France: Etampes, Essonne, Île-de-France France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 12 966 852 32,67 private IPO-09480.MS1 G30_myco Zymoseptoria tritici 2009 France: Etampes, Essonne, Île-de-France France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 16 956 668 42,73 private IPO-09491.MS1 G31_myco Zymoseptoria tritici 2009 France: Etampes, Essonne, Île-de-France France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 14 301 512 36,04 private IPO-09505.MS1 G32_myco Zymoseptoria tritici 2009 France: Etampes, Essonne, Île-de-France France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 48 967 328 123,39 private IPO-09508.MS1 G33_myco Zymoseptoria tritici 2009 France: Serazereux, Site 28, Eure-et-Loir, Centre [TO VERIFY] France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 24 779 010 62,44 private IPO-09522.MS1 G34_myco Zymoseptoria tritici 2009 France: Serazereux, Site 28, Eure-et-Loir, Centre [TO VERIFY] France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 17 064 558 43,00 private IPO-09532.MS1 G35_myco Zymoseptoria tritici 2009 France: Serazereux, Site 28, Eure-et-Loir, Centre [TO VERIFY] France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 13 804 440 34,78 private IPO-09547.MS1 G36_myco Zymoseptoria tritici 2009 France: Serazereux, Site 28, Eure-et-Loir, Centre [TO VERIFY] France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 19 304 306 48,64 private IPO-09562.MS1 G37_myco Zymoseptoria tritici 2009 France: Serazereux, Site 28, Eure-et-Loir, Centre [TO VERIFY] France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 14 167 862 35,70 private IPO-09580.MS1 G38_myco Zymoseptoria tritici 2009 France: Serazereux, Site 28, Eure-et-Loir, Centre [TO VERIFY] France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 78 919 632 198,86 private IPO-09593.MS1 G39_myco Zymoseptoria tritici 2009 France: Serazereux, Site 28, Eure-et-Loir, Centre [TO VERIFY] France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 21 506 238 54,19 private IPO-09596.MS1 G40_myco Zymoseptoria tritici 2009 France: Serazereux, Site 28, Eure-et-Loir, Centre [TO VERIFY] France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 26 799 958 67,53 private IPO-09605.MS1 G41_myco Zymoseptoria tritici 2009 France: Serazereux, Site 28, Eure-et-Loir, Centre [TO VERIFY] France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 26 674 890 67,21 private IPO-09624.MS1 G42_myco Zymoseptoria tritici 2009 France: Serazereux, Site 28, Eure-et-Loir, Centre [TO VERIFY] France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 25 758 778 64,91 private IPO-09628.MS1 G43_myco Zymoseptoria tritici 2009 France: Bignan, Morbihan, Bretagne France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 23 539 854 59,31 private IPO-09636.MS1 G44_myco Zymoseptoria tritici 2009 France: Bignan, Morbihan, Bretagne France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 22 783 046 57,41 private IPO-09657.MS1 G45_myco Zymoseptoria tritici 2009 France: Bignan, Morbihan, Bretagne France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 20 938 722 52,76 private IPO-09673.MS1 G46_myco Zymoseptoria tritici 2009 France: Bignan, Morbihan, Bretagne France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 66 709 050 168,09 private IPO-09699.MS1 G47_myco Zymoseptoria tritici 2009 France: Bignan, Morbihan, Bretagne France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 28 261 510 71,21 private IPO-09706.MS1 G48_myco Zymoseptoria tritici 2009 France: Bignan, Morbihan, Bretagne France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 23 053 822 58,09 private IPO-09755.MS1 G49_myco Zymoseptoria tritici 2009 France: Bignan, Morbihan, Bretagne France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 24 156 520 60,87 private IPO-09774.MS1 G50_myco Zymoseptoria tritici 2009 France: Lusignan, Vienne, Poitou-Charentes France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 26 699 550 67,28 private IPO-09789.MS1 G51_myco Zymoseptoria tritici 2009 France: Lusignan, Vienne, Poitou-Charentes France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 9 605 428 24,20 private IPO-09841.MS1 G52_myco Zymoseptoria tritici 2009 France: Lusignan, Vienne, Poitou-Charentes France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 36 748 162 92,60 private IPO-09855.MS1 G53_myco Zymoseptoria tritici 2009 France: Lusignan, Vienne, Poitou-Charentes France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 16 003 938 40,33 private IPO-09920.MS1 G54_myco Zymoseptoria tritici 2009 France: Plélo, Côtes-d'Armor, Bretagne France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 21 213 122 53,45 private IPO-09936.MS1 G55_myco Zymoseptoria tritici 2009 France: Plélo, Côtes-d'Armor, Bretagne France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 7 280 712 18,35 private IPO-09950.MS1 G56_myco Zymoseptoria tritici 2009 France: Plélo, Côtes-d'Armor, Bretagne France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 19 763 512 49,80 private IPO-09966.MS1 G57_myco Zymoseptoria tritici 2009 France: Plélo, Côtes-d'Armor, Bretagne France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 23 107 662 58,23 private IPO-09980.MS1 G58_myco Zymoseptoria tritici 2009 France: Plélo, Côtes-d'Armor, Bretagne France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 23 669 938 59,64 private IPO-09990.MS1 G59_myco Zymoseptoria tritici 2009 France: Plélo, Côtes-d'Armor, Bretagne France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 23 534 480 59,30 private IPO-09995.MS1 G60_myco Zymoseptoria tritici 2009 France: Plélo, Côtes-d'Armor, Bretagne France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 21 531 362 54,25 private IPO-10123.MS1 G61_myco Zymoseptoria tritici 2010 France: La Pouëze, Maine-et-Loire, Pays de la Loire France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 22 815 124 57,49 private IPO-10166.MS1 G62_myco Zymoseptoria tritici 2010 France: La Pouëze, Maine-et-Loire, Pays de la Loire France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 22 509 166 56,72 private IPO-10207.MS1 G63_myco Zymoseptoria tritici 2010 France: La Pouëze, Maine-et-Loire, Pays de la Loire France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 17 040 130 42,94 private IPO-10213.MS1 G64_myco Zymoseptoria tritici 2010 France: La Pouëze, Maine-et-Loire, Pays de la Loire France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 19 143 584 48,24 private IPO-10224.MS1 G65_myco Zymoseptoria tritici 2010 France: La Pouëze, Maine-et-Loire, Pays de la Loire France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 15 647 024 39,43 private IPO-10249.MS1 G66_myco Zymoseptoria tritici 2010 France: La Pouëze, Maine-et-Loire, Pays de la Loire France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 22 910 548 57,73 private IPO-10262.MS1 G67_myco Zymoseptoria tritici 2010 France: La Pouëze, Maine-et-Loire, Pays de la Loire France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 20 912 302 52,69 private IPO-10265.MS1 G68_myco Zymoseptoria tritici 2010 France: La Pouëze, Maine-et-Loire, Pays de la Loire France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 17 642 732 44,46 private IPO-10271.MS1 G69_myco Zymoseptoria tritici 2010 France: La Pouëze, Maine-et-Loire, Pays de la Loire France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 20 102 986 50,65 private IPO-10273.MS1 G70_myco Zymoseptoria tritici 2010 France: La Pouëze, Maine-et-Loire, Pays de la Loire France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 24 728 578 62,31 private S10_10-3a.MS1 G71_myco Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Caphorn INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 31 090 216 78,34 private S10_11-3a.MS1 G72_myco Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 28 318 534 71,36 private S10_11-3d.MS1 G73_myco Remove missing data Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 120 178 842 302,82 private S10_11-5b.MS1 G74_myco Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 29 225 268 73,64 private S10_2-5c.MS1 G75_myco Zymoseptoria tritici 2010 France: Tarn France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 7 229 878 18,22 private S10_3-2e.MS1 G76_myco Zymoseptoria tritici 2010 France: Haute-Garonne France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 32 801 516 82,65 private S10_9-1a.MS1 G77_myco Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 22 945 110 57,82 private 09.ASA.3a.pz.MS2 G79_myco Zymoseptoria tritici 2009 France: Crisenoy (77) France West Europe Triticum aestivum Alixan INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 10 870 848 27,39 private 09.CB1.MS1 G80_myco Zymoseptoria tritici 2009 France: Yrouerre (89) France West Europe Triticum aestivum Garcia INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 24 666 180 62,15 private 09.BDE.2b.MS1 G81_myco MOVE british (not in analyzed population) Zymoseptoria tritici 2009 United-Kingdom: Aby (Lincolshire) United-Kingdom West Europe Triticum aestivum Humbert INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 15 942 832 40,17 private 09-AEH-15b.pz.MS1 G82_myco Zymoseptoria tritici 2009 France: Pacé (35) France West Europe Triticum aestivum Dinosaur INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 12 410 782 31,27 private 10-BLX-11A.MS1 G83_myco Zymoseptoria tritici 2010 France: Villiers St-Christophe (02) France West Europe Triticum aestivum Bermude INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 33 524 296 84,47 private SYN32.MS1 G84_myco Zymoseptoria tritici 2006 France: Grisolles (32) France West Europe Triticum aestivum NaN INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 13 929 622 35,10 private S6.MS1 G85_myco MOVE other species (not in analyzed population) Zymoseptoria tritici 2007 Spain: Botanical garden, Cordoba Spain West Europe Triticum sp. NaN INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 8 330 832 20,99 private INRA09-FS0808 I04_myco_reseq Zymoseptoria tritici 2009 France: Grignon, Yvelines, Île-de-France France West Europe Triticum aestivum Soissons INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 32 915 610 82,94 private INRA09-FS0802 I03_myco_reseq Zymoseptoria tritici 2009 France: Grignon, Yvelines, Île-de-France France West Europe Triticum aestivum Soissons INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 78 717 110 198,35 private INRA09-FS0813 I05_myco_reseq Zymoseptoria tritici 2009 France: Grignon, Yvelines, Île-de-France France West Europe Triticum aestivum Soissons INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 27 012 258 68,06 private INRA09-FS0732 I07_myco_reseq Zymoseptoria tritici 2009 France: Grignon, Yvelines, Île-de-France France West Europe Triticum aestivum Soissons INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 28 543 416 71,92 private INRA09-FS0806 I12_myco_reseq Zymoseptoria tritici 2009 France: Grignon, Yvelines, Île-de-France France West Europe Triticum aestivum Soissons INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 37 019 934 93,28 private INRA10-FS1006 I24_myco_reseq Zymoseptoria tritici 2009 France: Grignon, Yvelines, Île-de-France France West Europe Triticum aestivum Soissons INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 27 853 562 70,18 private INRA10-FS1008 I25_myco_reseq Zymoseptoria tritici 2009 France: Grignon, Yvelines, Île-de-France France West Europe Triticum aestivum Soissons INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 24 404 466 61,49 private INRA10-FS1022 I28_myco_reseq Zymoseptoria tritici 2009 France: Grignon, Yvelines, Île-de-France France West Europe Triticum aestivum Soissons INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 26 937 618 67,88 private IPO-323.MS G86 Remove bacterial conta (not in analyzed population) Zymoseptoria tritici 1981 The Netherlands: W. Brabant The Netherlands West Europe Triticum aestivum Arminda INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-1 WGS Illumina HiSeq 2000 PE100 15 200 622 38,30 private IPO-323.MS B4A6 MOVE (not in analyzed population) Zymoseptoria tritici 1981 The Netherlands: W. Brabant The Netherlands West Europe Triticum aestivum Arminda INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 27 284 374 68,75 private IPO-323.MS B7C8 MOVE (not in analyzed population) Zymoseptoria tritici 1981 The Netherlands: W. Brabant The Netherlands West Europe Triticum aestivum Arminda INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 30 565 652 77,02 private S10_10-1b.MS1 G087 Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Caphorn INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 31 695 814 79,87 private S10_10-1e.MS1 G088 Remove clone =G087 (not in analyzed population) Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Caphorn INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 30 881 938 77,82 private S10_10-2b.MS1 G089 Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Caphorn INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 27 466 198 69,21 private S10_10-2d.MS1 G090 Remove clone =G089 (not in analyzed population) Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Caphorn INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 28 587 726 72,03 private S10_11-1a.MS1 G091 Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 34 379 788 86,63 private S10_11-2d.MS1 G092 Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 31 913 768 80,42 private S10_2-1a.MS1 G093 Zymoseptoria tritici 2010 France: Tarn France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 23 854 914 60,11 private S10_2-1h.MS1 G094 Zymoseptoria tritici 2010 France: Tarn France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 25 649 826 64,63 private S10_2-5h.MS1 G095 Zymoseptoria tritici 2010 France: Tarn France West Europe Triticum aestivum Premio INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 28 900 776 72,82 private S10_3-1e.MS1 G096 Zymoseptoria tritici 2010 France: Haute-Garonne France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 25 748 110 64,88 private S10_3-2f.MS1 G097 Zymoseptoria tritici 2010 France: Haute-Garonne France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 26 662 240 67,18 private S10_3-4e.MS1 G098 Zymoseptoria tritici 2010 France: Haute-Garonne France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 29 553 384 74,47 private S10_3-5d.MS1 G099 Zymoseptoria tritici 2010 France: Haute-Garonne France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 29 588 370 74,56 private S10_9-1c.MS1 G100 Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 31 869 702 80,30 private S10_9-2b.MS1 G101 Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 32 966 560 83,07 private S10_9-5a.MS1 G102 Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 19 773 888 49,83 private S10_9-5b.MS1 G103 Zymoseptoria tritici 2010 France: Oise France West Europe Triticum aestivum Apache INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 30 266 776 76,27 private INRA13-LG0595 LG0595 MOVE durum (not in analyzed population) Zymoseptoria tritici 2013 France: Binas, Centre (41) France West Europe Triticum durum Sculptur INRAE BIOGER Marcel TC BECKMAN COULTER GENOMICS GANDALF-Mgram-2 WGS Illumina HiSeq 2000 PE100 27 495 410 69,28 private