column definition transcript transcript name chromosome chromosome start start of transcript end end of transcript Seq Description sequence description from Blast2GO Seq Length sequence length from Blast2GO #Hits number of blast hits Blast2GO min eValue minimal evalue of Hits Blast2GO mean Similarity mean similarity of hits Blast2GO #GOs number of GOs from Blast of Blast2GO GOs GO of Blast of Blast2GO EC Enzyme Codes of Blast2GO Interproscan GOs from IPRSCAN Cpos cleavage site from SignalP Smax Score max from SignalP SP SignalP (Y/N) network SignalP network Localization TragetP localization (S,M,-) TMHMM number of TM domain from TMHMM EffectorP Effector EffectorP_prob EffectorP probability 4dpi mean TPM replicates 4dpi 11dpi mean TPM replicates 11dpi 13dpi mean TPM replicates 13dpi 20dpi mean TPM replicates 20dpi AE mean TPM replicates AE (Yeast Extrat Glycerol) Glu mean TPM replicates Glucose Man mean TPM replicates Mannitol Suc mean TPM replicates Sucrose Gal mean TPM replicates Galactose Xyl mean TPM replicates Xylose effector_rescue found wth effector_rescue method new_locus gene found in a locus never annotated Up4dpi gene upregulated in 4dpi vs Man,Gal,Xyl Up11dpi gene upregulated in 11dpi vs Man,Gal,Xyl Up13dpi gene upregulated in 13dpi vs Man,Gal,Xyl Up20dpi gene upregulated in 20dpi vs Man,Gal,Xyl SSP gene annotated as SSP (see rules in Mat et Met) secretome gene annotated as secreted (see rule in Mat et Met) JGI_genes corresponding gene MPI_genes corresponding gene JGI_split_genes comes from a JGI splitted gene MPI_split_genes comes from a MPI splitted gene JGI_fusion_genes comes from a fusion of JGI genes MPI_fusion_genes comes from a fusion of MPI genes Morais is a Morais secretome gene Gohari is a Gohari SSP gene Gohari_code Gohari code (SSP) identical_all_old gene identical to all old annotations (JGI, MPI, Curtin, RRES) isoform_impact impact of alernative isoforms (CDS, UTR, both, unknown) aed_tr aed score of RNA-Seq based transcripts aed_pr aed score of databanks proteins aed_lg aed score of Iso-Seq long read transcripts DIU_medium Differential Isoform Usage between in vitro growth medium DIU_infection Differential Isoform Usage between in vitro growth medium and infection stage (at least one infection stage) DIU_infection_specific Differential Isoform Usage between in vitro growth medium and infection stage (all infection stages)